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Publications

CEND affiliates and fellows are research leaders - publishing new discoveries to accelerate progress against neglected and emerging diseases.

Publications

How proteins fold

Carlos Bustamante, Christian M Kaiser, Erik Lindahl, Robert Sosa, Giovanni Volpe

Evaluating the impact of antiviral post-exposure prophylaxis for health-care workers during ebolavirus outbreaks: a modelling study

Jacob N Stapley, Youngsuk Ko, Geetha Jeyapragasan, Elana MG Chan, Abel W Walekhwa, Cathal Mills, Christophe Fraser, Arthur L Reingold, Dav Ebengo, Christl A Donnelly, Placide K Mbala, Charles Whittaker

Improving Fidelity of Implementation of Self-administered Pulse Oximetry and Remote Patient Monitoring in Honduras during the COVID-19 Pandemic

Kathryn  W. Roberts, Berta Alvarez, Michael de St. Aubin, Omar Diaz, Salome Garnier,  Rachel See,  Saul Cruz, Lorenzo Pavon, Anthony D. So, Ligia Paina, Tara Kirk Sell, Shiony Midence, Angela Amador Ochoa, Homer Mejia Santos, Jonathan Ochoa, Sogeiry Solis, Devan Dumas, Margaret Baldwin, C. Daniel Schnorr, Alcides Martinez, Avi J. Hakim, Eric Nilles

Harmonizing standards and resources for the medical genome

Euan A Ashley, Ash A Alizadeh, Hanae Armitage, Ami S Bhatt, Yair Blumenfeld, Andrew Carroll, R Martin Chavez, Petros Giannikopoulos, Megan E Grove, Meghan C Halley, Kiran Khush, Niall J Lennon, Samantha Maragh, Alexander Marson, Benedict Paten, Adam M Phillippy, Matthew H Porteus, Heidi L Rehm, Bradley R Ringeisen, Julia Salzman, Valerie A Schneider, Fritz J Sedlazeck, Lars M Steinmetz, Fyodor D Urnov, Stacia K Wyman, Justin M Zook, Lloyd B Minor, Jennifer A Doudna

Impaired IFNγ responsiveness of monocyte-derived lung cells limits immunity to Mycobacterium tuberculosis

Weihao Zheng, Jason D Limberis, Zachary P Howard, Alexander Mohapatra, Enzo Takagi, Joel D Ernst

Estimating probabilities of malaria importation in southern Mozambique through modelling P. falciparum genomics and mobility patterns

Arnau Pujol, Arlindo Chidimatembue, Clemente da Silva, Simone Boene, Henriques Mbeve, Pau Cisteró, Carla García-Fernández, Arnau Vañó-Boira, Dário Tembisse, José Inácio, Glória Matambisso, Fabião Luis, Nelo Ndimande, Humberto Munguambe, Lidia Nhamussua, Wilson Simone, Andrés Aranda-Díaz, Manuel García-Ulloa, Neide Canana, Maria Tusell, Júlia Montaña, Laura Fuente-Soro, Khalid Ussene Bapu, Maxwell Murphy, Bernardete Rafael, Eduard Rovira-Vallbona, Caterina Guinovart, Bryan Greenhouse, Sonia Maria Enosse, Francisco Saúte, Pedro Aide, Baltazar Candrinho, Alfredo Mayor

From the Laboratory to the Field: Assessing the Usability of the NTDscope in the Tropical Rainforest Region of Gabon

Rella Zoleko Manego, Lillian Rene Endamne, Victor Pahl, María Díaz de León Derby, Ghyslain Mombo-Ngoma, Daniel A Fletcher, Isaac I Bogoch, Michael Ramharter, Saskia Dede Davi

AutoBlot: deterministic single-cell western blotting reveals proteomic diversity in rare cell populations

Cyril Deroy, Md Nazibul Islam, Nadine Goldhammer, Lorraine Jiang, Jennifer M Rosenbluth, Amy E Herr

Longitudinal antibody profiling after dengue reveals distinct dynamics by antibody specificity over 18 months

Sandra Bos, Tulika Singh, José Victor Zambrana, Elias Duarte, Reinaldo Mercado-Hernandez, Julia Huffaker, Aaron Graber, Angel Balmaseda, Eva Harris

Unified climate factors predict influenza outbreak seasonality across tropical and temperate regions

Aleksandra R Stamper, Wenchang Yang, Caroline E Wagner, Ayesha S Mahmud, Rachel E Baker

Sustained high prevalence of multiple antimalarial drug resistance markers in Uganda in 2023–2024

Thomas Katairo, Victor Asua, Francis D Semakuba, Bienvenu Nsengimaana, Shahiid Kiyaga, Nicholas Hathaway, Kathryn Murie, Stephen Tukwasibwe, Innocent Wiringilimaana, Jackie Nakasaanyaa, Caroline Mwubaha, Karen B Achom, Trevor E Esilu, Alisen Ayitewalah, Monica Mbabazi, Kisakye D Kabbale, Jerry Mulondo, Eric Watyekele, Andrés Aranda-Diaz, Catherine S Maiteki, Jimmy Opigo, Grant Dorsey, Samuel L Nsobya, Moses R Kamya, Bosco B Agaba, Isaac Ssewanyana, Bryan Greenhouse, Philip J Rosenthal, Jessica Briggs, Melissa D Conrad

Acceptability and appropriateness of remote monitoring and self-administered pulse oximetry among COVID-19 patients in Honduras: a mixed-methods study

Kathryn W. Roberts, Berta Alvarez, Omar Diaz, Michael de St Aubin, Salome Garnier, Saul Cruz, Lorenzo Pavon, Angela Ochoa, Sogeiry Solis, Shiony Midence, Homer Mejía Santos, Jonatan Ochoa, Devan Dumas, Margaret Baldwin, C Daniel Schnorr, Alcides Martinez, Ligia Paina, Eric Nilles

Foodborne sources of antimicrobial-resistant Escherichia coli in community-acquired urinary tract infections in Bangladesh

Mohammed Badrul Amin, Brandon M Flatgard, Kazi Injamamul Hoque, Rizwana Khan, Md Rayhanul Islam, Mahdia Rahman, Eva Raphael, Mohammad Aminul Islam

A multi-omics study reveals pathway-level insights and predictive biomarkers in pediatric TB

Zaynab Mousavian, Mark R Segal, Roger I Calderon, Juaneta Luiz, Esin Nkereuwem, Peter Wambi, Mandar Paradkar, Molly F Franke, Gunilla Källenius, Beate Kampmann, Aarti Kinikar, George B Sigal, Christopher Sundling, Danielle L Swaney, Eric Wobudeya, Heather J Zar, Jeffrey M Collins, Adithya Cattamanchi, Joel D Ernst, Devan Jaganath

User experiences with food storage in a meatsafe (mesh-covered food storage cabinet) in an informal settlement in Dhaka, Bangladesh

Musarrat Jabeen Rahman, Syeda Nurunnahar, Mahbubur Rahman, Laura H Kwong, Peter J Winch

Enhancing epidemic forecast usability for policymakers: A global mixed-methods study

Paula Christen, Loice Achieng Ombajo, Anne Cori, Jeanette Dawa, Bimandra A Djaafara, Teresia Njoki Kimani, Camille MJ Schneider, Sabine L van Elsland, Mwangi Thumbi, Maria Veras, Charles Whittaker, Lilith K Whittles, Oliver J Watson

Assembly and Reactions of Artificial Metalloenzymes in Streptomyces albus

Sukriyo Chakraborty, Soonkyu Hwang, Jing Huang, Dongping Chen, Yan Chen, Christopher J Petzold, Douglas S Clark, Aindrila Mukhopadhyay, Jay D Keasling, John F Hartwig

First Therapeutic Efficacy Study (TES) in Djibouti: A Critical Milestone Amid Rising Regional Threats

Sinknesh Wolde Behaksra, Samatar Kayad Guelleh, Solomon Sisay, Yisihak Abreham Weldehana, Daniel Mussa Weyesa, Tirhas Endale, Assia Adlao Hamad, Natnael Lemessa Hundera, Dawit Hailu Alemayehu, Elias B Tafa, William Louie, Andres Aranda-Diaz, Meklit Shiferaw, Matiwos Kidane Ayele, Fikregabrail Aberra Kassa, Dagim Hailegebrel Lakew, Amanuel Shimelash, Betelhem Akililu Kebede, Melat Abdo, Migbaru Keffale, Yahya Osman Moussa, Tesfaye Sisay Tessema, Bryan Greenhouse, Abdoulilah Ahmed Abdi, Bouh Abdi Khaireh, Fitsum G Tadesse

Target product profiles of laboratory and data analytical frameworks for genotyping to monitor antimalarial efficacy

Mateusz M Plucinski, Amy Wesolowski, Inna Gerlovina, Aimee R Taylor, Jessica Briggs, Andrés Aranda-Díaz, Monica Golumbeanu, Marko Bajic, Jeffrey A Bailey, Joel LN Barratt, Caroline Buckee, Awa B Deme, Ingrid Felger, Anita Ghansah, Ian Hastings, Johanna Helena Kattenberg, Alfredo Mayor, Didier Menard, Leah F Moriarty, Daniel Neafsey, Lucy Okell, Isabella Oyier, Jaishree Raman, Philip J Rosenthal, Anna Rosanas-Urgell, Robert Verity, Sarah K Volkman, Christian Nsanzabana, Bryan Greenhouse

Cross-clade vaccination to overcome sarbecovirus or merbecovirus neutralization gaps

Wan Ni Chia, Feng Zhu, Samuel Mo Sheng Cheng, Wee Chee Yap, Abeer N. Alshukairi, Yun Yan Mah, Mayfong Mayxay, Vilada Chansamouth, Andrew Letizia, Beng Lee Lim, Yidan Wang, Madeline Sheng Si Kwek, Tierra Smiley Evans, Ohnmar Aung, Hlaing Myat Thu, Christine K. Johnson, Yanqun Wang, Jincun Zhao, Jessica E. Manning, Christina Yek, Chanthap Lon, Seng Heng, Sovann Ly, Rithea Leang, Rekol Huy, Aghnianditya Kresno Dewantari, Frilasita Aisyah Yudhaputri, Khin Saw Aye Myint, Matthew P. Rubach, John A. Crump, Venance P. Maro, Nicole J. Moreland, Aimee Paterson, Richard Charlewood, Jingjing Song, Shiwei Chen, Wan Yi Tan, Chris Ka Pun Mok, Catherine Hong Huan Hor, David Lye, David SC. Hui, Barnaby E. Young, Malik Peiris, Lin-Fa Wang, and Chee Wah Tan.